Results
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| Property | Organism | Value | Units | ID | Details |
|---|---|---|---|---|---|
| Typical mRNA degradation time | Bacteria Escherichia coli | ~3 to 8 | minutes | 108598 | Bakshi S, Siryaporn A... |
| Turnover rate constants of degradation of ribosomal proteins | Bacteria Streptomyces coelicolor | 0.058 - 0.132 Table - link | 1/hour | 110440 | Jayapal, K.P., Sui, S.... |
| Length of peptides that are product of proteasome 20S degradation | Eukaryotes | 2 to 24 | amino acid residues | 108111 | Bhutani N, Venkatraman P... |
| Average mRNA degradation time | Bacteria Escherichia coli | 5 to 10 | min | 106253 | Taniguchi Y, Choi PJ... |
| Half time of degradation of α-synuclein by proteasome | Human Homo sapiens | 1.84 (±0.16) | Hours | 108112 | M. Catherine Bennett... |
| Specific inhibition of X-βgal degradation by dipeptides | Eukaryotes | Table - link | N/A | 109460 | Gonda DK, Bachmair A... |
| Measured degradation rates (half-lives) of 184 whole cell proteins | Bacteria Escherichia coli | 10 proteins 2 - 5 hours: 37 proteins 5 - 23 hours: the remainder were stable | hours | 109925 | Maurizi MR. Proteases... |
| Characteristic time of axin degradation | African clawed frog Xenopus laevis | 6 | min | 101956 | Lee et al. The Roles... |
| Fraction of proteins that display degradation rates more than threefold faster than the proteome average | Unspecified | <5 | % | 112250 | Larance M, Ahmad Y, Kirkwood... |
| Total protein half life | Grass Dactylis glomerata | 4 | Days | 103660 | Scheurwater I, Dünnebacke M... |
| Total protein half life | Grass Festuca ovina | 6 | Days | 103661 | Scheurwater I, Dünnebacke M... |
| Degradation rates for HeLa proteins identified by LC-MS/MS | Human Homo sapiens | Table - link | N/A | 112257 | Doherty MK, Hammond DE... |
| Degradation rate of alpha mating factor receptor | Budding yeast Saccharomyces cerevisiae | 4e-4 | molecules/cell/sec | 104296 | Yi TM, Kitano H, Simon... |
| The contribution of different steps in gene expression to the variance in protein abundances between genes | Mammalian tissue culture cell | Table - link | N/A | 110237 | Li et al. (2014), System... |
| Vmax of the degradation of ubiquitinated Ub5-DHFR by mammalian 26S proteasomes | Mammals | 4.7 (Table - link) | molecules/min/26S | 109854 | Peth A, Nathan JA, Goldberg... |
| Estimated rate of peptide chain degradation by proteasome in Hela cell extract | Eukaryotes | ~0.2 | peptide chains/min | 108032 | Hendil KB, Hartmann-Petersen... |
| Energy cost for the degradation of ubiquitinated Ubn-Sic1 by mammalian 26S proteasomes | Mammals | 100 - 160 Table - link | ATP/molecule | 109852 | Peth A, Nathan JA, Goldberg... |
| Standard gibbs free energy for aerobic degradation of hexose | Generic | -2870 | kJ/mol | 104422 | Schink B. Energetics... |
| Degradation time of half of sigma 32 factor proteins during steady-state growth | Bacteria Escherichia coli | 1 | min | 102226 | El-Samad H, Kurata H... |
| Protein half-lives in E. coli | Bacteria Escherichia coli | Table - link | N/A | 109921 | Maurizi MR. Proteases... |